STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2017PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr2785 probable integral membrane efflux protein. (516 aa)    
Predicted Functional Partners:
Daci_0324
PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3248 transporter, MFS family.
  
   
 0.756
Daci_3366
PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1703 major facilitator superfamily MFS_1.
  
   
 0.754
Daci_2018
PFAM: globin; KEGG: ajs:Ajs_3454 globin.
       0.642
Daci_3742
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA3448 probable multidrug resistance B (translocase) transmembrane protein.
  
   
 0.605
Daci_2016
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3311 transcriptional regulator, LysR family.
       0.499
Daci_0687
PFAM: ferredoxin; cytochrome P450; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5278 ferredoxin:cytochrome P450:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region.
  
 0.494
Daci_3365
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_1867 drug resistance transporter, Bcr/CflA subfamily.
  
   
 0.430
Daci_4753
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bbt:BBta_6813 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase.
     
 0.423
Daci_5152
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_1536 drug resistance transporter Bcr/CflA subfamily.
  
   
 0.422
Daci_5149
PFAM: Ankyrin; KEGG: bur:Bcep18194_B0772 hypothetical protein.
 
 0.419
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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