STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2020PFAM: protein of unknown function DUF1486; KEGG: reh:H16_B1892 hypothetical protein. (132 aa)    
Predicted Functional Partners:
Daci_2019
PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0685 putative taurine dehydrogenase, large subunit.
 
     0.864
Daci_1995
Cobaltochelatase; PFAM: Cobalt chelatase CobT subunit; KEGG: reu:Reut_B3756 CobT protein.
 
     0.777
Daci_1992
TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: vei:Veis_3999 thiamine pyrophosphate enzyme domain protein TPP-binding; Belongs to the TPP enzyme family.
 
     0.721
Daci_1994
Cobaltochelatase; KEGG: reu:Reut_B3755 putative MoxR-like ATPase; PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
     0.663
Daci_2021
PFAM: Spore germination protein; amino acid permease-associated region; KEGG: reu:Reut_B3753 amino acid permease-associated region.
 
     0.613
Daci_2255
Dehydrogenase; KEGG: sco:SCO7641 dehydrogenase.
 
   
 0.488
Daci_0936
KEGG: bbr:BB1856 putative integral membrane protein.
  
     0.476
Daci_1253
KEGG: ajs:Ajs_0499 hypothetical protein.
  
     0.474
Daci_1984
PFAM: Na+/solute symporter; KEGG: reh:H16_B0867 APC transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.439
Daci_5934
PFAM: pili assembly chaperone; KEGG: bam:Bamb_4023 pili assembly chaperone.
  
     0.437
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.