STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2087KEGG: pfl:PFL_1368 conserved hypothetical protein. (396 aa)    
Predicted Functional Partners:
Daci_3122
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3456 binding-protein-dependent transport systems inner membrane component.
  
 
 0.992
Daci_3121
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3457 ABC transporter-related protein.
  
 
 0.963
Daci_3123
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3455 binding-protein-dependent transport systems inner membrane component.
   
 
  0.902
Daci_3124
PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3454 putative periplasmic solute-binding protein.
     
  0.900
Daci_2086
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; KEGG: psb:Psyr_3939 regulatory protein, GntR.
 
   
 0.801
Daci_2088
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pst:PSPTO_4198 cobalamin synthesis protein/P47K family protein.
       0.708
Daci_1133
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_01887 putative ABC transporter substrate binding protein.
  
  
 0.648
Daci_1283
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smd:Smed_4878 ABC transporter related; Belongs to the ABC transporter superfamily.
  
  
 0.648
Daci_1588
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0913 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
  
  
 0.648
Daci_4799
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB1451 probable ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
  
  
 0.648
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.