STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2128PFAM: protein of unknown function DUF989; KEGG: ajs:Ajs_1128 protein of unknown function DUF989. (443 aa)    
Predicted Functional Partners:
Daci_2127
TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: pna:Pnap_1013 protein of unknown function DUF182.
 
     0.862
Daci_2121
TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: ajs:Ajs_1123 transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.838
Daci_2110
Urate catabolism protein; KEGG: ajs:Ajs_1117 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase.
 
    0.815
Daci_5077
PFAM: Ureidoglycolate hydrolase; KEGG: csa:Csal_0080 ureidoglycolate hydrolase.
 
    0.813
Daci_5909
KEGG: mpt:Mpe_A0798 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
     0.762
Daci_5910
TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: mpt:Mpe_A0799 putative xanthine dehydrogenase (subunit A) oxidoreductase protein.
 
     0.757
Daci_2147
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.698
Daci_2109
KEGG: ajs:Ajs_1115 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; PFAM: peptidase M20; peptidase dimerisation domain protein.
 
    0.528
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.