STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2142PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein. (385 aa)    
Predicted Functional Partners:
Daci_2135
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3101 ABC transporter related.
 
 
 0.980
Daci_2136
PFAM: inner-membrane translocator; KEGG: aav:Aave_1133 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.974
Daci_2137
PFAM: inner-membrane translocator; KEGG: aav:Aave_1134 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.973
Daci_2138
PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein.
 
  
 
0.920
Daci_2146
PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1142 basic membrane lipoprotein.
  
  
 
0.906
Daci_2144
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
       0.596
Daci_2143
PFAM: Rieske [2Fe-2S] domain protein; KEGG: aav:Aave_1136 Rieske (2Fe-2S) domain protein.
       0.579
Daci_2141
PFAM: peptidase S41; KEGG: hch:HCH_04120 periplasmic protease.
     
 0.471
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.