STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2184KEGG: aav:Aave_1969 hypothetical protein. (352 aa)    
Predicted Functional Partners:
purM
KEGG: ajs:Ajs_2994 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein.
       0.826
Daci_0719
PFAM: sodium/hydrogen exchanger; KEGG: aav:Aave_0435 sodium/hydrogen exchanger.
 
    0.722
Daci_4870
KEGG: ajs:Ajs_1766 putative transmembrane protein.
  
     0.566
Daci_3970
KEGG: aav:Aave_2832 hypothetical protein.
 
     0.526
Daci_2519
KEGG: aav:Aave_3010 hypothetical protein.
  
     0.506
Daci_5096
PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen.
  
     0.506
Daci_2186
TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: aav:Aave_1971 chromosomal replication initiator, DnaA; Belongs to the DnaA family.
  
  
 0.446
Daci_2901
KEGG: aav:Aave_1797 peptidase M14, carboxypeptidase A.
  
     0.444
Daci_4869
KEGG: ajs:Ajs_1767 putative transmembrane protein.
  
     0.427
Daci_5200
PFAM: phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_3191 phospholipase D/transphosphatidylase.
 
     0.417
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.