Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Daci_2206PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_2980 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (415 aa)    
Predicted Functional Partners:
Daci_2207
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2979 acyl-CoA dehydrogenase domain protein.
 
 
  0.960
Daci_0173
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0133 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
  
 
0.901
Daci_0100
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: eba:ebA2996 succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.900
Daci_2346
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: aav:Aave_2081 succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.900
Daci_3494
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
     
 0.900
Daci_5050
KEGG: reh:H16_B0982 succinate-semialdehyde dehydrogenase (NADP+); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.900
Daci_5717
PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_3830 succinate-semialdehyde dehydrogenase (NAD(P)(+)).
    
  0.900
Daci_2205
PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_2981 uncharacterized protein UPF0065.
  
    0.492
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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