STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2261PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0975 ABC-type transport system involved in cytochrome c biogenesis ATPase component-like protein. (217 aa)    
Predicted Functional Partners:
Daci_0146
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1046 binding-protein-dependent transport systems inner membrane component.
  
  
 0.787
Daci_1140
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1091 binding-protein-dependent transport systems inner membrane component.
  
  
 0.787
Daci_2376
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2146 nitrate ABC transporter, inner membrane subunit.
  
  
 0.787
Daci_4527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_4514 binding-protein-dependent transport systems inner membrane component.
  
  
 0.787
Daci_4637
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3042 binding-protein-dependent transport systems inner membrane component.
  
  
 0.787
Daci_5618
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1867 ABC-type sulfonate transporter, permease component.
  
  
 0.787
Daci_5822
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pap:PSPA7_2932 probable permease of ABC transporter.
  
  
 0.787
Daci_5727
PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; KEGG: reh:H16_B1758 allophanate hydrolase.
     
 0.614
Daci_2260
KEGG: aav:Aave_2031 hypothetical protein.
       0.532
Daci_1053
PFAM: luciferase family protein; KEGG: bbt:BBta_4850 hypothetical protein.
  
  
 0.488
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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