STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2264KEGG: ajs:Ajs_1151 hypothetical protein. (111 aa)    
Predicted Functional Partners:
Daci_2263
Signal transduction histidine kinase, LytS; PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: aav:Aave_2036 integral membrane sensor signal transduction histidine kinase.
     
 0.827
Daci_2265
Membrane protein-like protein; KEGG: mlo:mlr2123 hypothetical protein.
 
     0.746
Daci_4736
PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2488 major facilitator superfamily MFS_1.
  
     0.664
Daci_4952
KEGG: aav:Aave_2989 hypothetical protein.
  
    0.662
Daci_0875
PFAM: regulatory protein MarR; KEGG: ajs:Ajs_4000 transcriptional regulator, MarR family.
  
 
   0.656
Daci_2381
KEGG: vei:Veis_1656 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
   
 0.656
Daci_2262
Two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: aav:Aave_2035 response regulator receiver protein.
     
 0.625
Daci_1342
KEGG: vei:Veis_1900 hypothetical protein.
  
     0.615
Daci_5347
KEGG: aav:Aave_1882 hypothetical protein.
 
     0.577
Daci_5694
PFAM: General secretion pathway L; KEGG: aav:Aave_0920 hypothetical protein.
  
     0.559
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.