STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2289Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: ajs:Ajs_2514 regulatory protein, ArsR. (109 aa)    
Predicted Functional Partners:
Daci_2287
TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bbr:BB2781 putative NADPH-dependent FMN reductase.
 
   
 0.780
Daci_2288
TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bbr:BB2782 arsenate reductase.
 
   
 0.773
Daci_2290
KEGG: rfr:Rfer_4021 hypothetical protein.
       0.548
Daci_0489
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mpt:Mpe_A2345 arsenate reductase, putative.
 
  
 0.516
Daci_4381
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pna:Pnap_2588 protein tyrosine phosphatase.
 
  
 0.493
Daci_0488
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A2346 hypothetical protein.
 
   
 0.443
Daci_0490
TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: har:HEAR1962 arsenite efflux pump ACR3.
 
  
 0.434
Daci_2291
KEGG: hch:HCH_06792 hypothetical protein.
       0.408
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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