Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Score
Daci_2318KEGG: aav:Aave_1283 putative substrate-binding periplasmic (pbp) ABC transporter protein. (403 aa)    
Predicted Functional Partners:
Daci_5160
PFAM: inner-membrane translocator; KEGG: aav:Aave_1285 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.852
Daci_5161
PFAM: inner-membrane translocator; KEGG: aav:Aave_1284 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.842
Daci_5164
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1280 ABC transporter-related protein.
 
    0.836
Daci_5163
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3121 ABC transporter related.
 
    0.820
Daci_6025
PFAM: inner-membrane translocator; KEGG: aav:Aave_4752 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.642
Daci_0574
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3953 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.601
Daci_3309
PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1680 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.586
Daci_3310
PFAM: inner-membrane translocator; KEGG: ajs:Ajs_1681 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.559
Daci_6024
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2565 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
    0.544
macB
ABC transporter related; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
   
   0.483
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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