Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2328PFAM: protein of unknown function DUF444; KEGG: mpt:Mpe_A3778 hypothetical protein; Belongs to the UPF0229 family. (422 aa)    
Predicted Functional Partners:
Daci_2329
PFAM: SpoVR family protein; KEGG: mpt:Mpe_A3777 hypothetical protein.
 
  
 0.996
Daci_2327
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mpt:Mpe_A3779 hypothetical protein.
 
  
 0.995
Daci_3991
PFAM: protein of unknown function DUF883 ElaB; KEGG: ajs:Ajs_2135 protein of unknown function DUF883, ElaB.
   
    0.501
Daci_5223
PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: ajs:Ajs_3210 PhoH family protein.
   
    0.499
Daci_3990
KEGG: aav:Aave_2453 hypothetical protein.
   
    0.430
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.