STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2393PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2808 acyl-CoA dehydrogenase domain protein. (596 aa)    
Predicted Functional Partners:
Daci_3306
PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_1678 AMP-dependent synthetase and ligase.
 
 
  0.928
Daci_2391
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit.
 
 
 0.800
Daci_2390
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_2810 electron transfer flavoprotein beta-subunit.
 
 
 0.762
Daci_2394
PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD.
  
  
 0.748
Daci_2388
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_2812 enoyl-CoA hydratase/isomerase.
  
 0.731
Daci_1403
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit.
 
 
 0.709
Daci_1529
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3623 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.681
Daci_5039
PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3136 AMP-dependent synthetase and ligase.
 
 
  0.675
Daci_1339
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_0594 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.673
Daci_1393
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_3739 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.673
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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