STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2447KEGG: azo:azo0657 hypothetical protein. (351 aa)    
Predicted Functional Partners:
Daci_2446
KEGG: azo:azo0658 hypothetical membrane protein.
     0.952
Daci_2448
KEGG: aba:Acid345_0330 hypothetical protein.
       0.509
Daci_1691
PFAM: fatty acid desaturase; KEGG: bpe:BP3207 putative fatty acid desaturase.
  
     0.499
Daci_2449
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: aav:Aave_1527 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
     0.441
Daci_1690
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bbr:BB0106 3-oxoacyl-(acyl carrier protein) synthase.
  
     0.422
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.