STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2484KEGG: pol:Bpro_3373 putative lipoprotein. (192 aa)    
Predicted Functional Partners:
Daci_5251
KEGG: aav:Aave_1202 small-conductance mechanosensitive channel-like protein.
  
     0.628
Daci_2519
KEGG: aav:Aave_3010 hypothetical protein.
  
     0.585
Daci_2034
KEGG: vei:Veis_4154 hypothetical protein.
  
     0.558
Daci_2477
KEGG: pna:Pnap_1325 phosphoesterase, DHHA1.
  
     0.478
Daci_0382
PFAM: VanZ family protein; KEGG: ajs:Ajs_0269 VanZ family protein.
  
     0.454
Daci_2556
KEGG: pol:Bpro_4732 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane.
  
     0.445
Daci_0836
KEGG: ajs:Ajs_4003 hypothetical protein.
  
     0.438
Daci_1527
KEGG: aav:Aave_1923 periplasmic lipoprotein-like protein.
  
     0.431
Daci_5328
KEGG: ajs:Ajs_3321 hypothetical protein.
  
     0.430
Daci_1574
PFAM: CheW domain protein; KEGG: ajs:Ajs_3576 putative CheW protein.
  
     0.428
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.