STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2519KEGG: aav:Aave_3010 hypothetical protein. (189 aa)    
Predicted Functional Partners:
Daci_2520
PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_1644 protein of unknown function DUF112, transmembrane.
 
  
 0.906
Daci_3050
KEGG: mms:mma_0439 small permease component of tripartite tricarboxylate transporter.
     
  0.900
Daci_2518
PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_1642 uncharacterized protein UPF0065.
 
  
 0.752
Daci_0719
PFAM: sodium/hydrogen exchanger; KEGG: aav:Aave_0435 sodium/hydrogen exchanger.
  
     0.750
Daci_2477
KEGG: pna:Pnap_1325 phosphoesterase, DHHA1.
  
     0.725
Daci_1840
KEGG: ajs:Ajs_3490 putative lipoprotein.
  
     0.685
Daci_0382
PFAM: VanZ family protein; KEGG: ajs:Ajs_0269 VanZ family protein.
  
     0.664
Daci_3007
KEGG: ajs:Ajs_2549 hypothetical protein.
  
     0.644
Daci_2901
KEGG: aav:Aave_1797 peptidase M14, carboxypeptidase A.
  
     0.639
Daci_2570
PFAM: conserved hypothetical protein; KEGG: aav:Aave_3271 uncharacterized protein UPF0065.
 
  
 0.635
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.