STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2528PFAM: lipolytic protein G-D-S-L family; KEGG: pau:PA14_23690 putative secreted protein. (437 aa)    
Predicted Functional Partners:
Daci_0994
KEGG: bur:Bcep18194_A5272 hypothetical protein.
 
     0.550
Daci_3533
PFAM: Tannase and feruloyl esterase; KEGG: bra:BRADO4865 putative feruloyl esterase.
 
   
 0.546
Daci_5761
PFAM: conserved hypothetical protein; KEGG: pfl:PFL_5821 hypothetical protein.
  
     0.480
Daci_3775
PFAM: Ricin B lectin; KEGG: sco:SCO7212 secreted glycosyl hydrolase.
  
   
 0.444
Daci_2527
Hypothetical protein.
       0.431
Daci_1793
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: rme:Rmet_3321 dienelactone hydrolase.
  
   
 0.428
Daci_2529
PFAM: regulatory protein ArsR; KEGG: mpt:Mpe_A2424 transcriptional regulator.
       0.412
Daci_1420
TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; KEGG: bam:Bamb_5443 filamentous haemagglutinin family outer membrane protein.
  
 
 0.408
Daci_1424
TIGRFAM: adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; KEGG: bpl:BURPS1106A_1129 cell surface protein.
  
 
 0.408
Daci_3119
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: rca:Rcas_0471 conserved repeat domain.
  
 
 0.408
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.