Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_2528PFAM: lipolytic protein G-D-S-L family; KEGG: pau:PA14_23690 putative secreted protein. (437 aa)    
Predicted Functional Partners:
Daci_0994
KEGG: bur:Bcep18194_A5272 hypothetical protein.
 
     0.547
Daci_3533
PFAM: Tannase and feruloyl esterase; KEGG: bra:BRADO4865 putative feruloyl esterase.
 
   
 0.541
Daci_2015
PFAM: protein of unknown function DUF214; KEGG: aav:Aave_3824 protein of unknown function DUF214.
 
 
   0.498
Daci_5761
PFAM: conserved hypothetical protein; KEGG: pfl:PFL_5821 hypothetical protein.
  
     0.480
Daci_3775
PFAM: Ricin B lectin; KEGG: sco:SCO7212 secreted glycosyl hydrolase.
  
   
 0.445
Daci_2527
Hypothetical protein.
       0.431
Daci_1793
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: rme:Rmet_3321 dienelactone hydrolase.
  
   
 0.429
Daci_0969
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bpe:BP0523 probable haloacid dehalogenase.
 
  
 0.418
Daci_2529
PFAM: regulatory protein ArsR; KEGG: mpt:Mpe_A2424 transcriptional regulator.
       0.412
Daci_1420
TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; KEGG: bam:Bamb_5443 filamentous haemagglutinin family outer membrane protein.
  
 
 0.402
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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