STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2587PFAM: P2 GpU family protein; KEGG: pna:Pnap_3314 phage P2 GpU family protein. (146 aa)    
Predicted Functional Partners:
Daci_2586
PFAM: late control D family protein; KEGG: pna:Pnap_3315 phage late control D family protein.
 
  
 0.982
Daci_2588
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: pna:Pnap_3313 phage tail tape measure protein, TP901 family.
 
  
 0.961
Daci_2590
PFAM: tail E family protein; KEGG: rso:RSc1916 probable phage-related protein.
 
    0.961
Daci_2591
TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pna:Pnap_3309 phage major tail tube protein.
 
   0.961
Daci_2592
PFAM: tail sheath protein; KEGG: pna:Pnap_3308 phage tail sheath protein.
 
 
 0.953
Daci_2608
PFAM: tail X family protein; KEGG: spt:SPA2577 putative phage tail protein.
 
 
 0.950
Daci_2642
PFAM: tail X family protein; KEGG: spt:SPA2577 putative phage tail protein.
 
 
 0.950
Daci_2601
PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein.
 
 
 0.948
Daci_2635
PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein.
 
 
 0.948
Daci_2602
PFAM: GPW/gp25 family protein; KEGG: csa:Csal_1387 gpW/GP25.
 
 
 0.946
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.