STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2637TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: stm:STM2710 phage baseplate assembly-like protein. (241 aa)    
Predicted Functional Partners:
Daci_2636
PFAM: GPW/gp25 family protein; KEGG: csa:Csal_1387 gpW/GP25.
 
 
 0.986
Daci_2635
PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein.
 
  
 0.983
Daci_2642
PFAM: tail X family protein; KEGG: spt:SPA2577 putative phage tail protein.
 
  
 0.982
Daci_2638
PFAM: P2 phage tail completion R family protein; KEGG: rso:RSc1929 probable tail completion-like protein.
 
    0.965
Daci_2602
PFAM: GPW/gp25 family protein; KEGG: csa:Csal_1387 gpW/GP25.
 
 
 0.943
Daci_2601
PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein.
 
  
 0.928
Daci_2586
PFAM: late control D family protein; KEGG: pna:Pnap_3315 phage late control D family protein.
 
  
 0.927
Daci_2620
PFAM: late control D family protein; KEGG: pna:Pnap_3315 phage late control D family protein.
 
  
 0.927
Daci_2634
Hypothetical protein; KEGG: syf:Synpcc7942_0741 phage tail protein I.
  
  
 0.925
Daci_2591
TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pna:Pnap_3309 phage major tail tube protein.
 
  
 0.924
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.