STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2666PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ajs:Ajs_1061 substrate-binding region of ABC-type glycine betaine transport system. (348 aa)    
Predicted Functional Partners:
Daci_2667
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1064 binding-protein-dependent transport systems inner membrane component.
 
 0.999
Daci_2668
KEGG: ajs:Ajs_1065 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase.
 
 0.999
Daci_1057
PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0075 ABC-type transporter, substrate binding protein.
  
  
 0.458
Daci_0365
PFAM: protein of unknown function DUF140; KEGG: vei:Veis_0920 protein of unknown function DUF140.
     
 0.426
Daci_2917
KEGG: ajs:Ajs_2592 ABC-type transport system ipermease component.
     
 0.426
Daci_5535
PFAM: protein of unknown function DUF140; KEGG: aav:Aave_1014 protein of unknown function DUF140.
     
 0.426
Daci_1588
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0913 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
    
 0.410
Daci_3121
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3457 ABC transporter-related protein.
    
 0.410
Daci_4799
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB1451 probable ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
    
 0.410
Daci_4745
KEGG: bmn:BMA10247_0877 hypothetical protein.
   
    0.402
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.