STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2705PFAM: sulfatase; protein of unknown function DUF1705; KEGG: xft:PD1689 inner membrane protein. (557 aa)    
Predicted Functional Partners:
Daci_2706
KEGG: xcb:XC_3128 hypothetical protein.
 
   
 0.934
Daci_1718
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: vei:Veis_4349 sulfatase.
  
  
 
0.914
Daci_1142
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: ajs:Ajs_1955 sulfatase.
  
  
 
0.913
Daci_2704
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
 
   
 0.857
Daci_2707
KEGG: swi:Swit_3710 outer membrane efflux protein.
       0.773
Daci_1722
KEGG: xcb:XC_3128 hypothetical protein.
 
   
 0.713
Daci_0932
KEGG: vei:Veis_0197 PAP2 (acid phosphatase) superfamily protein-like protein.
 
   
 0.647
Daci_2703
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shn:Shewana3_1278 transcriptional regulator, LysR family.
       0.632
Daci_2708
KEGG: azo:azo0269 hypothetical protein.
       0.631
Daci_2709
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_3011 heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
    0.628
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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