Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Daci_0453 | Daci_0454 | KEGG: rme:Rmet_1489 hypothetical protein. | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | 0.861 |
Daci_0453 | Daci_0455 | KEGG: rme:Rmet_1489 hypothetical protein. | KEGG: rme:Rmet_1487 hypothetical protein. | 0.861 |
Daci_0453 | Daci_0458 | KEGG: rme:Rmet_1489 hypothetical protein. | KEGG: ajs:Ajs_2933 conserved hypothetical replication initiator and transcription repressor protein. | 0.826 |
Daci_0453 | Daci_2717 | KEGG: rme:Rmet_1489 hypothetical protein. | KEGG: rme:Rmet_3020 putative conjugal transfer TRAF transmembrane protein. | 0.783 |
Daci_0453 | Daci_2718 | KEGG: rme:Rmet_1489 hypothetical protein. | KEGG: rme:Rmet_3021 hypothetical protein. | 0.783 |
Daci_0453 | Daci_2719 | KEGG: rme:Rmet_1489 hypothetical protein. | KEGG: rme:Rmet_3022 hypothetical protein. | 0.788 |
Daci_0453 | Daci_2720 | KEGG: rme:Rmet_1489 hypothetical protein. | PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_3023 cobyrinic acid a,c-diamide synthase. | 0.703 |
Daci_0453 | Daci_2721 | KEGG: rme:Rmet_1489 hypothetical protein. | KEGG: rme:Rmet_3024 conserved hypothetical replication initiator and transcription repressor protein. | 0.779 |
Daci_0453 | Daci_2722 | KEGG: rme:Rmet_1489 hypothetical protein. | KEGG: rme:Rmet_3025 hypothetical protein. | 0.792 |
Daci_0454 | Daci_0453 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | KEGG: rme:Rmet_1489 hypothetical protein. | 0.861 |
Daci_0454 | Daci_0455 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | KEGG: rme:Rmet_1487 hypothetical protein. | 0.949 |
Daci_0454 | Daci_0458 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | KEGG: ajs:Ajs_2933 conserved hypothetical replication initiator and transcription repressor protein. | 0.866 |
Daci_0454 | Daci_2716 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | KEGG: pau:PA14_31070 hypothetical protein. | 0.783 |
Daci_0454 | Daci_2718 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | KEGG: rme:Rmet_3021 hypothetical protein. | 0.783 |
Daci_0454 | Daci_2719 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | KEGG: rme:Rmet_3022 hypothetical protein. | 0.790 |
Daci_0454 | Daci_2720 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rme:Rmet_3023 cobyrinic acid a,c-diamide synthase. | 0.670 |
Daci_0454 | Daci_2721 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | KEGG: rme:Rmet_3024 conserved hypothetical replication initiator and transcription repressor protein. | 0.778 |
Daci_0454 | Daci_2722 | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | KEGG: rme:Rmet_3025 hypothetical protein. | 0.792 |
Daci_0455 | Daci_0453 | KEGG: rme:Rmet_1487 hypothetical protein. | KEGG: rme:Rmet_1489 hypothetical protein. | 0.861 |
Daci_0455 | Daci_0454 | KEGG: rme:Rmet_1487 hypothetical protein. | KEGG: rme:Rmet_1258 putative conjugal transfer TRAF transmembrane protein. | 0.949 |
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