STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2760PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_0918 major facilitator superfamily MFS_1. (456 aa)    
Predicted Functional Partners:
Daci_2761
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ppf:Pput_2404 acyl-CoA dehydrogenase domain protein.
       0.773
Daci_2762
PFAM: regulatory protein MarR; KEGG: xcv:XCV0364 transcriptional regulator, MarR family.
     
 0.717
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.585
Daci_2759
PFAM: CoA-binding domain protein; KEGG: nar:Saro_0674 CoA-binding protein.
       0.523
Daci_4975
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: vei:Veis_4743 major facilitator superfamily MFS_1.
  
     0.505
Daci_3815
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_3480 major facilitator family transporter.
  
   
 0.495
Daci_0967
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: spe:Spro_3970 major facilitator superfamily MFS_1.
  
     0.463
Daci_1354
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ppu:PP_3740 major facilitator family transporter.
  
   
 0.455
Daci_4450
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azo:azo2543 putative 4-hydroxybenzoate transporter protein.
  
   
 0.406
Daci_2758
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccr:CC_2401 enoyl-CoA hydratase.
       0.405
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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