Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2772PFAM: UspA domain protein; KEGG: vei:Veis_1173 UspA domain protein. (147 aa)    
Predicted Functional Partners:
Daci_0110
PFAM: UspA domain protein; KEGG: ajs:Ajs_0074 UspA domain protein.
 
     0.765
Daci_2773
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_1082 heavy metal translocating P-type ATPase.
     
 0.607
Daci_3359
TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rpd:RPD_4087 methylated-DNA--protein-cysteine methyltransferase.
  
  
 0.475
Daci_4773
PFAM: arsenate reductase and related; KEGG: ajs:Ajs_2740 arsenate reductase and related; Belongs to the ArsC family.
   
  
 0.449
Daci_1000
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ajs:Ajs_3927 sigma 54 modulation protein/ribosomal protein S30EA.
 
  
 0.442
Daci_0449
PFAM: copper resistance B precursor; KEGG: ajs:Ajs_1234 copper resistance B precursor.
      
 0.416
Daci_2162
Transcriptional regulator, AraC family; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rso:RSc2570 probable ADA regulatory of adaptative response contains: methylated-DNA--protein-cysteine methyltransferaseO-6-methylguanine-DNA transcription regulator.
  
  
 0.416
Daci_2366
Histidine kinase; KEGG: pap:PSPA7_4410 virulence sensor protein BvgS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: extracellular solute-binding protein family 3.
  
 
 0.414
Daci_2774
TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: ajs:Ajs_1083 cytochrome oxidase maturation protein, cbb3-type.
  
    0.411
Daci_0550
PFAM: UspA domain protein; KEGG: ajs:Ajs_3869 UspA domain protein.
 
     0.402
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.