STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2779TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: ajs:Ajs_1088 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (484 aa)    
Predicted Functional Partners:
Daci_2776
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: ajs:Ajs_1085 cytochrome c oxidase, cbb3-type, subunit II.
 
  
 0.985
Daci_2778
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.979
Daci_2775
KEGG: ajs:Ajs_1084 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.972
Daci_2781
KEGG: rfr:Rfer_1936 hypothetical protein.
 
  
 0.768
Daci_2783
KEGG: ajs:Ajs_1092 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.766
Daci_2780
KEGG: aav:Aave_1528 hypothetical protein.
  
  
 0.762
Daci_2777
PFAM: Cbb3-type cytochrome oxidase component; KEGG: ajs:Ajs_1086 Cbb3-type cytochrome oxidase component.
  
  
 0.761
Daci_2773
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_1082 heavy metal translocating P-type ATPase.
 
  
 0.660
Daci_2499
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: rme:Rmet_2155 cytochrome c, class I.
  
  
 0.618
Daci_2774
TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: ajs:Ajs_1083 cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.614
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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