STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_27953''-kinase; PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: mms:mma_1889 streptomycin phosphotransferase. (265 aa)    
Predicted Functional Partners:
Daci_2793
PFAM: transport system permease protein; KEGG: pol:Bpro_2781 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.727
Daci_2794
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2362 ABC transporter related.
       0.727
Daci_2790
PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ajs:Ajs_1097 CobB/CobQ domain protein glutamine amidotransferase.
       0.600
Daci_2791
Cobalbumin biosynthesis protein; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.
       0.600
Daci_2792
PFAM: periplasmic binding protein; KEGG: pol:Bpro_2782 periplasmic binding protein.
       0.600
Daci_5149
PFAM: Ankyrin; KEGG: bur:Bcep18194_B0772 hypothetical protein.
  
     0.572
Daci_3577
PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4098 transporter, putative.
  
     0.532
Daci_1691
PFAM: fatty acid desaturase; KEGG: bpe:BP3207 putative fatty acid desaturase.
  
     0.430
Daci_5047
PFAM: GCN5-related N-acetyltransferase; KEGG: ppf:Pput_3213 GCN5-related N-acetyltransferase.
  
     0.426
Daci_2789
KEGG: pol:Bpro_2787 hypothetical protein.
       0.401
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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