Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_2911KEGG: ajs:Ajs_2599 copper tolerance protein. (482 aa)    
Predicted Functional Partners:
Daci_2910
PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_2600 multicopper oxidase, type 3.
 
   
 0.957
Daci_2907
KEGG: ajs:Ajs_2603 hypothetical protein.
 
 
 0.956
Daci_2909
PFAM: blue (type 1) copper domain protein; KEGG: ajs:Ajs_2601 blue (type 1) copper domain protein.
 
     0.945
Daci_2912
KEGG: ajs:Ajs_2598 hypothetical protein.
       0.783
Daci_2908
PFAM: protein of unknown function DUF411; KEGG: ajs:Ajs_2602 protein of unknown function DUF411.
       0.749
Daci_2913
KEGG: ajs:Ajs_2597 hypothetical protein.
       0.543
Daci_2915
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_2594 heavy metal translocating P-type ATPase.
 
  
 0.537
Daci_2906
PFAM: peptidase S58 DmpA; KEGG: ajs:Ajs_2605 peptidase S58, DmpA.
       0.523
Daci_0471
KEGG: pol:Bpro_3490 hypothetical protein.
 
 
 0.486
Daci_0474
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_3492 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.452
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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