STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_2928Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rso:RSc1243 probable sugar transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (351 aa)    
Predicted Functional Partners:
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.992
Daci_2930
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1241 putative rhizopine-binding precursor signal peptide protein.
 0.992
Daci_3183
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_3419 periplasmic binding protein/LacI transcriptional regulator.
 
 0.899
Daci_3182
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3418 ABC transporter related.
 
 0.894
Daci_4583
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2046 ABC transporter related.
 
 0.894
Daci_0785
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL80086 putative ATP-binding component of ABC transporter.
 
 0.893
Daci_4582
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2044 periplasmic binding protein/LacI transcriptional regulator.
 
 0.890
Daci_0786
KEGG: sme:SMb20484 putative ABC transporter periplasmic sugar-binding protein.
 
 0.862
Daci_2927
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4571 xylose isomerase-like TIM barrel.
 
    0.776
Daci_2926
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rso:RSc1245 putative protein implicated in myo-inositol catabolique pathway.
 
     0.775
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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