STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (521 aa)    
Predicted Functional Partners:
Daci_2930
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1241 putative rhizopine-binding precursor signal peptide protein.
 
 0.997
Daci_2928
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rso:RSc1243 probable sugar transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 0.992
Daci_4580
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bpm:BURPS1710b_A1792 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.911
Daci_3181
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: vei:Veis_3417 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.902
Daci_0783
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_3268 carbohydrate uptake ABC transporter 2 (CUT2) family, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.893
Daci_0784
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rle:pRL120193 putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.893
Daci_4582
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2044 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.892
Daci_3183
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_3419 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.891
Daci_0786
KEGG: sme:SMb20484 putative ABC transporter periplasmic sugar-binding protein.
 
 
 0.819
Daci_2924
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rso:RSc1248 hypothetical protein.
 
  
 0.674
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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