Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_2976PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_1813 ABC transporter related; Belongs to the ABC transporter superfamily. (562 aa)    
Predicted Functional Partners:
Daci_2975
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1812 binding-protein-dependent transport systems inner membrane component.
  
 0.976
Daci_2974
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1811 binding-protein-dependent transport systems inner membrane component.
 
  
 0.955
Daci_5438
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3615 binding-protein-dependent transport systems inner membrane component.
  
 0.937
Daci_5669
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4292 binding-protein-dependent transport systems inner membrane component.
  
 0.909
Daci_1055
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_4852 putative ABC transporter (permease protein).
  
 0.886
Daci_1242
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2223 peptide ABC transporter, permease protein, putative.
  
 0.864
Daci_2973
PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_1810 extracellular solute-binding protein, family 5.
 
  
 0.862
Daci_5670
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4291 binding-protein-dependent transport systems inner membrane component.
 
  
 0.838
Daci_5437
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3614 binding-protein-dependent transport systems inner membrane component.
 
  
 0.834
Daci_1241
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_3142 binding-protein-dependent transport systems inner membrane component.
 
  
 0.832
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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