STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3012KEGG: aav:Aave_3368 hypothetical protein. (144 aa)    
Predicted Functional Partners:
Daci_3011
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
  
 0.812
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.717
Daci_3687
PFAM: Propeptide PepSY amd peptidase M4; KEGG: prw:PsycPRwf_1922 propeptide, PepSY amd peptidase M4.
  
     0.676
Daci_3778
KEGG: aav:Aave_0646 UvrD/REP helicase.
  
     0.664
Daci_5522
KEGG: ajs:Ajs_0761 hypothetical protein.
  
   
 0.606
Daci_1657
PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 protein of unknown function DUF490.
  
     0.597
Daci_1058
PFAM: OsmC family protein; KEGG: bur:Bcep18194_C7506 hypothetical protein.
  
     0.574
Daci_5313
KEGG: hch:HCH_02671 hypothetical protein.
  
     0.552
Daci_1239
KEGG: ajs:Ajs_0492 hypothetical protein.
  
     0.543
Daci_1059
KEGG: rpa:RPA2648 hypothetical protein.
  
     0.530
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.