STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3062Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2754 transcriptional regulator, GntR family. (228 aa)    
Predicted Functional Partners:
Daci_3836
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pmy:Pmen_0702 transcriptional regulator, GntR family.
  
     0.770
Daci_0253
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1995 GntR domain protein.
 
  
 0.743
Daci_6022
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aav:Aave_4749 GntR domain protein.
 
  
 0.707
Daci_3063
PFAM: transglutaminase domain protein; KEGG: aav:Aave_3990 transglutaminase domain protein.
       0.553
Daci_3061
PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A3794 membrane-fusion protein.
       0.409
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.