STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3121PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3457 ABC transporter-related protein. (353 aa)    
Predicted Functional Partners:
Daci_3122
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3456 binding-protein-dependent transport systems inner membrane component.
 
 
 0.997
Daci_3123
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3455 binding-protein-dependent transport systems inner membrane component.
 
  
  0.992
Daci_3124
PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3454 putative periplasmic solute-binding protein.
 
 
 0.990
Daci_2087
KEGG: pfl:PFL_1368 conserved hypothetical protein.
  
 
 0.963
cpdA
Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.851
Daci_3125
PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: aav:Aave_3453 transcriptional regulator, LacI family.
 
     0.637
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.533
Daci_1519
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.510
Daci_1284
TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_03086 ABC-type Fe3+ transport system, permease component.
 
  
 0.506
Daci_4800
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1452 probable permease component of ABC transporter.
 
  
 0.496
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.