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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
metN-2ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (348 aa)    
Predicted Functional Partners:
Daci_3173
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_2344 binding-protein-dependent transport systems inner membrane component.
 
 0.996
Daci_1780
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_2366 binding-protein-dependent transport systems inner membrane component.
 
 0.985
Daci_4597
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_2296 probable transmembrane ABC transporter protein.
 
 0.984
Daci_5612
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1477 ABC-type transporter, permease component: MUT family.
 
 0.984
Daci_3174
TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_2342 lipoprotein, YaeC family; Belongs to the nlpA lipoprotein family.
 
 
 0.946
Daci_4605
TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_2342 lipoprotein, YaeC family; Belongs to the nlpA lipoprotein family.
 
 
 0.884
Daci_5614
PFAM: NLPA lipoprotein; KEGG: reh:H16_B1479 ABC-type transporter, periplasmic component: MUT family; Belongs to the nlpA lipoprotein family.
 
 
 0.884
Daci_2841
TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ajs:Ajs_3160 lipoprotein, YaeC family.
 
 
 0.883
Daci_1782
PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B0309 NlpA lipoprotein.
 
 
 0.882
Daci_1783
PFAM: NLPA lipoprotein; KEGG: bam:Bamb_4689 NlpA lipoprotein.
 
 
 0.882
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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