STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3200SMART: Pathogenesis-related transcriptional factor and ERF protein; KEGG: nha:Nham_2362 hypothetical protein. (174 aa)    
Predicted Functional Partners:
Daci_3199
Hypothetical protein.
       0.773
Daci_3201
PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_4541 pathogenesis-related transcriptional factor and ERF protein.
 
    
0.591
Daci_3197
Hypothetical protein.
       0.556
Daci_3198
KEGG: pna:Pnap_4291 hypothetical protein.
       0.556
Daci_3202
KEGG: aav:Aave_4134 hypothetical protein.
       0.463
Daci_4102
PFAM: Lambda NinG family protein; KEGG: pfl:PFL_3773 NinG protein.
 
     0.460
Daci_1939
PFAM: Lambda NinG family protein; KEGG: pfl:PFL_3773 NinG protein.
 
     0.458
Daci_3227
KEGG: mms:mma_2189 hypothetical protein.
 
   
 0.445
Daci_0335
KEGG: sfr:Sfri_3475 hypothetical protein.
  
     0.418
Daci_3221
Hypothetical protein; KEGG: aav:Aave_1690 uncharacterized phage-encoded protein.
 
    0.418
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.