STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3202KEGG: aav:Aave_4134 hypothetical protein. (386 aa)    
Predicted Functional Partners:
Daci_2298
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: reu:Reut_C6418 AAA ATPase, central region.
   
 
 0.803
Daci_3201
PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_4541 pathogenesis-related transcriptional factor and ERF protein.
       0.780
Daci_3200
SMART: Pathogenesis-related transcriptional factor and ERF protein; KEGG: nha:Nham_2362 hypothetical protein.
       0.463
Daci_3199
Hypothetical protein.
       0.447
Daci_3205
PFAM: ERF family protein; KEGG: rsq:Rsph17025_1819 ERF family protein.
       0.400
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.