STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3306PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_1678 AMP-dependent synthetase and ligase. (545 aa)    
Predicted Functional Partners:
Daci_2393
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2808 acyl-CoA dehydrogenase domain protein.
 
 
  0.928
Daci_3285
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3077 acyl-CoA dehydrogenase domain protein.
 
 
  0.711
Daci_4753
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bbt:BBta_6813 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase.
  
 
0.694
Daci_3315
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_1687 acyl-CoA dehydrogenase domain protein.
 
 
  0.686
Daci_1337
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_4089 acyl-CoA dehydrogenase domain protein.
 
 
  0.655
Daci_1395
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_4313 acyl-CoA dehydrogenase domain protein.
 
 
  0.641
Daci_5374
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pna:Pnap_3224 acyl-CoA dehydrogenase domain protein.
 
 
  0.635
Daci_2761
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ppf:Pput_2404 acyl-CoA dehydrogenase domain protein.
 
 
  0.626
Daci_1860
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mpt:Mpe_A3709 NADH dehydrogenase (quinone).
    
 
 0.598
Daci_0120
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain protein.
 
 
  0.597
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.