STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3344L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (560 aa)    
Predicted Functional Partners:
Daci_3346
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: aav:Aave_3519 FMN-dependent alpha-hydroxy acid dehydrogenase.
  
  
 0.725
Daci_4607
PFAM: FAD linked oxidase domain protein; KEGG: bam:Bamb_6039 FAD linked oxidase domain protein.
 
  
 0.682
Daci_3054
D-lactate dehydrogenase (cytochrome); PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: pol:Bpro_2755 D-lactate dehydrogenase (cytochrome).
 
  
 0.678
Daci_3345
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ent:Ent638_0131 GntR domain protein.
 
  
 0.671
Daci_5464
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: aav:Aave_3648 FAD linked oxidase domain protein.
  
  
 0.627
dld
D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.
 
  
 0.609
Daci_0306
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ajs:Ajs_0168 protein of unknown function DUF224, cysteine-rich region domain protein.
 
  
 0.536
Daci_0789
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bpl:BURPS1106A_A2112 dehydrogenase, FMN-dependent family.
  
  
 0.526
Daci_1384
L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bte:BTH_II0813 dehydrogenase, FMN-dependent family.
  
  
 0.526
Daci_4620
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: vei:Veis_3083 FMN-dependent alpha-hydroxy acid dehydrogenase.
  
  
 0.526
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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