STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3497KEGG: aav:Aave_3244 hypothetical protein. (242 aa)    
Predicted Functional Partners:
Daci_5620
KEGG: reh:H16_B1869 cytochrome c, mono-and diheme variants.
  
     0.751
Daci_0961
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_3684 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.684
Daci_3496
PFAM: AFG1-family ATPase; KEGG: ajs:Ajs_1825 AFG1-family ATPase.
       0.678
Daci_0949
PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_3691 cupin 2, conserved barrel.
  
    0.662
Daci_4401
PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4589 major facilitator superfamily MFS_1.
  
   
 0.639
Daci_4929
KEGG: ajs:Ajs_2388 hypothetical protein.
  
     0.611
Daci_2462
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2772 biopolymer transport protein ExbD/TolR.
  
 
 0.582
Daci_3571
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_2565 biopolymer transport protein ExbD/TolR.
  
 
 0.582
Daci_4624
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_3313 biopolymer transport protein ExbD/TolR.
  
 
 0.582
Daci_6005
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_4551 biopolymer transport protein ExbD/TolR.
  
 
 0.582
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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