Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Daci_3536PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: aav:Aave_3165 cobalamin (vitamin B12) biosynthesis CbiX protein. (137 aa)    
Predicted Functional Partners:
Daci_5849
Precorrin-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
    
 0.927
Daci_3537
PFAM: permease YjgP/YjgQ family protein; KEGG: aav:Aave_3164 permease YjgP/YjgQ family protein.
  
    0.819
Daci_3538
PFAM: permease YjgP/YjgQ family protein; KEGG: aav:Aave_3163 permease YjgP/YjgQ family protein.
  
    0.819
Daci_3535
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3166 transcriptional regulator, LysR family.
       0.709
Daci_3534
PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_1915 aminotransferase, class I and II.
     
 0.704
Daci_2368
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_2843 uroporphyrin-III C-methyltransferase.
  
  
 0.702
Daci_5846
KEGG: rsh:Rsph17029_1473 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
     
 0.624
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.612
Daci_1110
TIGRFAM: nitrate reductase, beta subunit; KEGG: ajs:Ajs_0437 nitrate reductase, beta subunit.
  
    0.575
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.567
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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