STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3566PFAM: Asparaginase/glutaminase; KEGG: aav:Aave_2559 asparaginase/glutaminase. (318 aa)    
Predicted Functional Partners:
Daci_3914
PFAM: aminotransferase class I and II; KEGG: pla:Plav_0095 aminotransferase class I and II.
 
  
 0.928
Daci_0890
PFAM: Asparaginase/glutaminase; KEGG: har:HEAR1103 putative L-asparaginase; putative signal peptide protein.
  
  
 
0.926
Daci_0564
KEGG: aav:Aave_4182 L-asparaginases, type II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; Belongs to the asparaginase 1 family.
  
  
 
0.920
Daci_2149
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 
 0.915
Daci_3603
PFAM: peptidase T2 asparaginase 2; KEGG: aav:Aave_1656 peptidase T2, asparaginase 2.
    
 0.910
argG
PFAM: argininosuccinate synthase; KEGG: rso:RSc2553 probable argininosuccinate synthase protein; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
   
 
 0.908
Daci_0071
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: vei:Veis_4736 aspartate racemase.
    
 0.907
Daci_4503
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: pfl:PFL_2830 aspartate racemase.
    
 0.907
Daci_5769
PFAM: aminotransferase class I and II; KEGG: pst:PSPTO_2925 aspartate aminotransferase.
    
 0.907
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: ajs:Ajs_3570 aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.902
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.