Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Score
Daci_3644Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1690 transcriptional regulator, AraC family. (379 aa)    
Predicted Functional Partners:
Daci_3643
PFAM: cytochrome P450; KEGG: bur:Bcep18194_B1689 cytochrome P450.
 
     0.845
Daci_5825
KEGG: pau:PA14_34490 putative acyl-CoA dehydrogenase.
  
     0.592
Daci_5823
KEGG: ppu:PP_3636 sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative.
  
     0.550
Daci_3928
KEGG: pfl:PFL_3184 acyl-CoA dehydrogenase, putative.
  
     0.530
Daci_5773
KEGG: bxe:Bxe_C1132 hypothetical protein.
  
     0.528
Daci_0275
KEGG: vei:Veis_4137 hypothetical protein.
  
     0.517
Daci_3884
KEGG: rpb:RPB_3526 hypothetical protein.
  
     0.472
Daci_2581
PFAM: replication gene A; KEGG: bps:BPSS1052 hypothetical bacteriophage replication protein.
  
     0.466
Daci_2615
PFAM: replication gene A; KEGG: bps:BPSS1052 hypothetical bacteriophage replication protein.
  
     0.466
Daci_0949
PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_3691 cupin 2, conserved barrel.
  
   0.462
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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