STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3701PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_3146 fumarylacetoacetate (FAA) hydrolase. (249 aa)    
Predicted Functional Partners:
Daci_3700
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: pna:Pnap_3147 maleylacetoacetate isomerase.
  
 
 0.977
Daci_3596
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: aav:Aave_2473 fumarylacetoacetate (FAA) hydrolase.
  
  
 
0.906
Daci_2036
Fumarylacetoacetase; KEGG: bxe:Bxe_A2724 fumarylacetoacetase (HmgB); TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969.
     
 0.902
Daci_1126
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: aav:Aave_0742 fumarylacetoacetate (FAA) hydrolase.
     
  0.900
Daci_3702
PFAM: Cupin 2 conserved barrel domain protein; KEGG: pna:Pnap_3145 cupin 2, conserved barrel domain protein.
 
   
 0.859
Daci_1437
PFAM: fumarate lyase; KEGG: vei:Veis_4596 fumarate lyase.
  
 0.836
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.836
Daci_2425
KEGG: ajs:Ajs_2795 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.824
Daci_2424
KEGG: ajs:Ajs_2796 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
  0.810
Daci_2426
TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: ajs:Ajs_2794 succinate dehydrogenase, cytochrome b subunit.
   
 
  0.805
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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