Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_3742TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA3448 probable multidrug resistance B (translocase) transmembrane protein. (544 aa)    
Predicted Functional Partners:
Daci_3743
PFAM: secretion protein HlyD family protein; KEGG: eba:ebA3446 putative multidrug resistance protein.
 
 
 0.953
Daci_4248
PFAM: secretion protein HlyD family protein; KEGG: psa:PST_3103 probable multidrug resistance efflux pump.
 
 
 0.822
Daci_3744
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: eba:ebA3445 putative outer membrane protein.
 
 
 0.697
Daci_2017
PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr2785 probable integral membrane efflux protein.
  
   
 0.604
Daci_3745
PFAM: regulatory protein MarR; KEGG: rfr:Rfer_1513 transcriptional regulator, MarR family.
 
   
 0.528
Daci_3741
KEGG: bxe:Bxe_B2649 hypothetical protein.
     
 0.478
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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