Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3784Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bbr:BB1600 putative GntR-family transcriptional regulator. (222 aa)    
Predicted Functional Partners:
Daci_0236
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aav:Aave_1099 transcriptional regulator, GntR family.
  
     0.773
Daci_2815
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rfr:Rfer_0447 GntR-like.
  
  
 0.771
Daci_3836
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pmy:Pmen_0702 transcriptional regulator, GntR family.
  
     0.771
Daci_0253
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1995 GntR domain protein.
  
  
 0.767
Daci_5735
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_B1761 transcriptonal regulator, GntR-family.
  
     0.765
Daci_3345
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ent:Ent638_0131 GntR domain protein.
  
  
 0.732
Daci_6022
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aav:Aave_4749 GntR domain protein.
  
  
 0.710
Daci_3785
PFAM: conserved hypothetical protein; KEGG: reh:H16_B0983 probable extra-cytoplasmic solute receptor.
       0.511
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.