Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_3835Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein. (278 aa)    
Predicted Functional Partners:
Daci_0624
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: aav:Aave_4430 flagellar hook-associated protein FlgK.
  
 
 0.969
Daci_0620
PFAM: flagellar protein FliS; KEGG: ajs:Ajs_3810 flagellar protein FliS.
  
 
 0.899
Daci_0630
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: vei:Veis_0566 flagellar basal body FlaE domain protein.
  
 
 0.894
Daci_0641
KEGG: aav:Aave_4392 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase.
  
  
 0.876
Daci_0638
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.873
Daci_0640
PFAM: flagellar assembly protein FliH; KEGG: aav:Aave_4393 flagellar assembly protein FliH.
  
  
 0.868
Daci_0645
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ajs:Ajs_3800 flagellar motor switch protein FliM.
  
  
 0.868
Daci_0632
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ajs:Ajs_3828 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.867
Daci_0631
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
  
 0.866
Daci_0635
KEGG: aav:Aave_4418 anti-sigma-28 factor, FlgM.
  
  
 0.865
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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