Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_3839Hypothetical protein; KEGG: aav:Aave_1466 serine/threonine protein kinase. (262 aa)    
Predicted Functional Partners:
Daci_3838
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_1466 serine/threonine protein kinase.
     
0.776
Daci_3840
KEGG: aav:Aave_1467 tetratricopeptide TPR_2 repeat protein.
       0.773
Daci_3841
TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: aav:Aave_1468 FHA domain containing protein.
       0.654
Daci_3842
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_1469 protein serine/threonine phosphatase.
     
 0.643
Daci_3843
KEGG: aav:Aave_1470 lipoprotein, putative.
       0.597
Daci_3844
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: aav:Aave_1471 protein of unknown function DUF876.
       0.562
Daci_3845
TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_1472 OmpA/MotB domain protein.
       0.542
Daci_3846
TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: aav:Aave_1473 ImcF domain protein.
       0.520
Daci_3847
KEGG: aav:Aave_1474 hypothetical protein.
       0.519
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.458
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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