STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3911PFAM: HpcH/HpaI aldolase; KEGG: aav:Aave_4270 2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family. (293 aa)    
Predicted Functional Partners:
Daci_1787
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: rha:RHA1_ro10137 2-oxopent-4-enoate hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase.
 
 0.980
Daci_0101
KEGG: bbr:BB0739 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase.
 
 0.979
Daci_3129
KEGG: pol:Bpro_0971 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase.
 
 0.978
Daci_0100
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: eba:ebA2996 succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.907
Daci_2346
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: aav:Aave_2081 succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.907
Daci_5050
KEGG: reh:H16_B0982 succinate-semialdehyde dehydrogenase (NADP+); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.907
Daci_5717
PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_3830 succinate-semialdehyde dehydrogenase (NAD(P)(+)).
  
 
 0.907
Daci_3912
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: vei:Veis_3404 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.779
Daci_3910
PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3884 hypothetical protein.
       0.773
Daci_0102
PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bbr:BB0738 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
 
  
 0.682
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.