STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_3970KEGG: aav:Aave_2832 hypothetical protein. (228 aa)    
Predicted Functional Partners:
Daci_3969
KEGG: aav:Aave_2831 transglycosylase-associated protein.
       0.714
Daci_1458
KEGG: vei:Veis_4558 hypothetical protein.
  
     0.543
Daci_5608
TIGRFAM: cytidyltransferase-related domain protein; PFAM: NUDIX hydrolase; cytidylyltransferase; KEGG: ajs:Ajs_0701 cytidyltransferase-related domain.
 
     0.542
Daci_4998
KEGG: ajs:Ajs_1193 hypothetical protein.
  
     0.534
Daci_2184
KEGG: aav:Aave_1969 hypothetical protein.
 
     0.526
Daci_2901
KEGG: aav:Aave_1797 peptidase M14, carboxypeptidase A.
  
     0.511
Daci_0552
Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
  
     0.467
Daci_0719
PFAM: sodium/hydrogen exchanger; KEGG: aav:Aave_0435 sodium/hydrogen exchanger.
  
     0.456
Daci_3681
KEGG: esa:ESA_01915 hypothetical protein.
  
     0.435
Daci_3940
PFAM: OmpA/MotB domain protein; KEGG: ajs:Ajs_2055 OmpA/MotB domain protein.
  
     0.417
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.