STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_4030PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: swi:Swit_1108 activator of HSP90 ATPase 1 family protein. (158 aa)    
Predicted Functional Partners:
Daci_4027
PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bbr:BB4023 hypothetical protein.
    0.825
Daci_4031
PFAM: protein of unknown function DUF1428; KEGG: rpe:RPE_4844 protein of unknown function DUF1428.
 
     0.799
Daci_4029
KEGG: vco:VC0395_0589 hypothetical protein.
       0.787
Daci_4028
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: ajs:Ajs_2265 3-demethylubiquinone-9 3-methyltransferase.
 
     0.679
Daci_2050
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; KEGG: sme:SMc03843 putative transcription regulator protein.
 
  
 0.650
Daci_2857
KEGG: dge:Dgeo_0531 hypothetical protein.
 
     0.419
Daci_4338
KEGG: spc:Sputcn32_0588 hypothetical protein.
  
     0.415
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.